Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015940384.1_cds_XP_016484650.1_75647
CDS Infomation

[gene=LOC107805170] [db_xref=GeneID:107805170] [protein=carboxyl-terminal-processing peptidase 1, chloroplastic-like isoform X2] [protein_id=XP_016484650.1] [location=complement(join(31418..31534,31643..31726,31857..31901,31984..32060,32783..32951,33035..33139,34445..34582,35236..35355,35447..35824))] [gbkey=CDS]
Sequence

ATGAGGCTCCTCCACAGCCCCTTACCTCCACCACTGTTAACCTCCTCTGCACCGCGCAAA
ACCTCAATTCTTCCCAAAAAAGCTTCTGTCAACTATGCACAGAAACCCCTTCAACAAGCT
CTATCAACTGGGATCTCATTAGTTCTATCTTTGGGGCTTCTTGTTTCTGCTCCTAATTCC
ATCTTTGCCTTGGAATCTCCTTCAGTACTTGAATCTTCTAACTCAGTAAATTGCCCCGAG
AACGAGGTGGAGGAGGTGTACACTACTGAAGTATCAAAAGCGGTGAGCAATGAAAGGATT
GTGGAAGAGGCTTGGCAGATTGTGAACGACAGCTTTCTTAACACCAGCCCTCGTTCTTGG
TCTCCTGAATCTTGGCTTAAAAAGAAAGATGACATCTTAAGTTCATCAATTCAGACAAGG
TCGAAAGCTCATGATATTATCAAGCGGATGTTGGCTAGCTTGGGTGACCCCTATACACGT
TTTCTTTCTCCTGAAGAGTTCTCCAAGATGGCTAGATATGATATGACTGGGATTGGAGTT
AACCTCAGGGATGTTCCCGATGGCAATGGAGGTTCAAAACTGAAGGTTTTAGGGCTCCTA
TTGGATGGCCCTGCCCATAGCGCTGGTGTACGACAGGGAGATGAACTAGTGTCAGTGAAT
GGGGTGAATATGCGGGATAAATCTGCCTTTGAAGCATCTTCGCTGTTACTTGGTCCAAGT
GGGACATTTGTGAACATCATGGTCAAGCATGGGAATTGTGGACCTGTTCAATCCATTGAT
GTGGAGAGGCAGTCCATTGCTAAGACGCCGGTTTTTTATCGTCTGGAGCAGATTGAAAGT
GGTTCTGTTTCTGTTGGTTATGTGCGCCTAAAGGAGTTCAATGCATTGGCCAGAAAAGAT
TTGGTTACTGCAATTAAGCGACTTGAAGGCATGGGTGCCTCATCTTTTGTTCTTGATCTC
AGAGATAACCTAGGTGGACTAGTGCAGGCTGGCATTGAAATTGCGAAACTTTTTCTGAAT
GAAGGAGACACGGTGATTTCCACTGTTGGAAGGGATCCACAGTATAGAAGGAATATTGTT
GCAGAAGCTCCACCTCTTATTACAGCTCCAGTAATTGTTTTTCTCTTTGTTATTTTTGAA
ATGAACAATTGCATTAGTATTGTCCTGAATGAGAAACTTGGAACCTACCATTCACTGTCA
AATATGAAGCAGACTTTGCACGAAAACCTTTGA

Peptide Sequence

PEP ID

XP_016484650.1
PEP Infomation

PREDICTED: carboxyl-terminal-processing peptidase 1, chloroplastic-like isoform X2 [Nicotiana tabacum]
Sequence

MRLLHSPLPPPLLTSSAPRKTSILPKKASVNYAQKPLQQALSTGISLVLSLGLLVSAPNS
IFALESPSVLESSNSVNCPENEVEEVYTTEVSKAVSNERIVEEAWQIVNDSFLNTSPRSW
SPESWLKKKDDILSSSIQTRSKAHDIIKRMLASLGDPYTRFLSPEEFSKMARYDMTGIGV
NLRDVPDGNGGSKLKVLGLLLDGPAHSAGVRQGDELVSVNGVNMRDKSAFEASSLLLGPS
GTFVNIMVKHGNCGPVQSIDVERQSIAKTPVFYRLEQIESGSVSVGYVRLKEFNALARKD
LVTAIKRLEGMGASSFVLDLRDNLGGLVQAGIEIAKLFLNEGDTVISTVGRDPQYRRNIV
AEAPPLITAPVIVFLFVIFEMNNCISIVLNEKLGTYHSLSNMKQTLHENL

Transcript Sequence

Gene sequence data has not been registered.